Materials for the safetyGraphics R Pharma 2021 Workshop on 2021-10-29 from 9 AM - 12 noon ET.
The Interactive Safety Graphics (ISG) subteam of the ASA Biopharm-DIA Safety Working Group is an interdisciplinary effort that, amongst other things, seeks to provide a clinical safety workflow for monitoring during clinical development in an open source model.
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Workshop
We’ll be using RStudio Cloud for this workshop. Click this link to open an RStudio Project that includes all examples, exercises and a copy of the Slides (download pptx). We’ll also do a quick 3-question survey at this link.
⚠️ Caution: Since we’re using a cloud-based platform, we do not recommend using any private data during the workshop. Sample data is provided for all examples. ⚠️
Instructors
Instructor | Company |
---|---|
Spencer Childress | MMS |
Renan Escalante | Immuneering |
Maya Gans | Atorus Research |
Becca Krouse | Rho |
Eli Miller | Atorus Research |
Xiao Ni | Sarepta Theraputics |
Jeremy Wildfire | Gilead Sciences |
Schedule
Time | Activity |
---|---|
20 min | 🎬 Intro to safetyGraphics |
10 min | 📓 Hello World |
30 min | 📋 Loading Custom Data |
10 min | 📈 Chart/App Export |
10 min | ☕ Break |
1 hr | 📊 Creating Custom Charts |
40 min | ⌨️ Custom Domain |
20 min | 🎀 Wrap Up |
Helpful Links
Workshop
Project Web pages
Presentations
- Building Open Source Tools for Safety Monitoring: Advancing Research Through Community Collaboration Presented by Becca Krouse at R/Pharma 2019
- safetyGraphics v2.0 - Open Source Collaboration in Pharma using R and Shinyo Presented by Jeremy Wildfire at R/Pharma 2020
Papers
- The Safety Explorer Suite: Interactive Safety Monitoring for Clinical Trials, Wildfire et al. 2018
- A New Paradigm for Safety Signal Detection and Evaluation Using Open-Source Software Created by an Interdisciplinary Working Group. Buchanan et al. 2021
- Data Monitoring committees for clinical trials evaluating treatments of COVID-19 Tobias Mütze and Tim Friede. 2020